Run XCMS analysis

This module runs and observes an XCMS analysis with customizable settings and generates a new folder inside the selected file folder with results from the xcms analysis.

Load Data

Data must be centroided. Supported File Formats: .mzXML, .mzML, .cdf, .nc, .mzData

Load Presets

About the current default settings:

Download current settings

XCMS Settings

Automatic post-processing of MS data

Basic analysis and p-value calculation require more than one group set in File Grouping (in Analysis Settings).

Prepare data

Basic analysis

Analysis Settings

Job status

View status of a running XCMS job here

In the making